ClinVar 임상 비교
AlphaMissense AI 예측 vs ClinVar 실제 임상 분류 — 일치/불일치 분석
ClinVar 변이 (서브셋)
319,822
우리 보유 유전자만
커버 유전자
308
병원성/가능 변이
56,770
AM과 교차 가능
154,518
단백질 변이 추출
CHRM2: AM vs ClinVar 일치도
134 변이✓ 둘 다 병원성
0
✓ 둘 다 양성
7
⚠ CV=병원성 / AM=양성
0
⚠ CV=양성 / AM=병원성
0
— AM 미적재
127
AM ↔ ClinVar 비교 가능 변이 7건 중 7건 일치 / 0건 불일치 — 일치도 100%
변이별 비교
Max 500| 변이 | ClinVar 분류 | AM 점수 | AM 분류 | 일치 | |
|---|---|---|---|---|---|
| A158V | Uncertain significance | 0.829 | pathogenic | 해석 → | |
| A193T | Uncertain significance | 0.740 | pathogenic | 해석 → | |
| A265V | Uncertain significance | 0.073 | benign | 해석 → | |
| A414P | Uncertain significance | 0.121 | benign | 해석 → | |
| A464T | Uncertain significance | 0.097 | benign | 해석 → | |
| C324Y | Uncertain significance | 0.147 | benign | 해석 → | |
| C416W | Uncertain significance | 0.992 | pathogenic | 해석 → | |
| C429S | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| D220E | Likely benign | 0.087 | benign | ✓ | 해석 → |
| D229G | Uncertain significance | 0.111 | benign | 해석 → | |
| D253N | Likely benign | 0.069 | benign | ✓ | 해석 → |
| D304V | Uncertain significance | 0.089 | benign | 해석 → | |
| D97H | Uncertain significance | 0.998 | pathogenic | 해석 → | |
| E175D | Uncertain significance | 0.286 | benign | 해석 → | |
| E223D | Uncertain significance | 0.103 | benign | 해석 → | |
| E279D | Uncertain significance | 0.086 | benign | 해석 → | |
| E305G | Uncertain significance | 0.062 | benign | 해석 → | |
| E318K | Uncertain significance | 0.083 | benign | 해석 → | |
| F152V | Uncertain significance | 0.633 | pathogenic | 해석 → | |
| F21L | Uncertain significance | 0.245 | benign | 해석 → | |
| G174A | Uncertain significance | 0.376 | ambiguous | 해석 → | |
| G238A | Uncertain significance | 0.199 | benign | 해석 → | |
| G254V | Uncertain significance | 0.069 | benign | 해석 → | |
| G277E | Uncertain significance | 0.097 | benign | 해석 → | |
| G277R | Uncertain significance | 0.147 | benign | 해석 → | |
| G73S | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| H208Y | Uncertain significance | 0.169 | benign | 해석 → | |
| H458Y | Uncertain significance | 0.192 | benign | 해석 → | |
| H53Y | Uncertain significance | 0.285 | benign | 해석 → | |
| I153V | Uncertain significance | 0.066 | benign | 해석 → | |
| I178L | Uncertain significance | 0.883 | pathogenic | 해석 → | |
| I201S | Uncertain significance | 0.809 | pathogenic | 해석 → | |
| I217V | Uncertain significance | 0.079 | benign | 해석 → | |
| I240M | Uncertain significance | 0.070 | benign | 해석 → | |
| I240T | Uncertain significance | 0.129 | benign | 해석 → | |
| I325F | Uncertain significance | 0.117 | benign | 해석 → | |
| I360M | Uncertain significance | 0.070 | benign | 해석 → | |
| I365T | Uncertain significance | 0.920 | pathogenic | 해석 → | |
| I397V | Uncertain significance | 0.091 | benign | 해석 → | |
| I39F | Uncertain significance | 0.213 | benign | 해석 → | |
| I39N | Uncertain significance | 0.944 | pathogenic | 해석 → | |
| I435V | Uncertain significance | 0.064 | benign | 해석 → | |
| I72L | Uncertain significance | 0.663 | pathogenic | 해석 → | |
| I86T | Uncertain significance | 0.111 | benign | 해석 → | |
| I86V | Uncertain significance | 0.086 | benign | 해석 → | |
| K138E | Uncertain significance | 0.793 | pathogenic | 해석 → | |
| K218E | Uncertain significance | 0.315 | benign | 해석 → | |
| K264N | Uncertain significance | 0.378 | ambiguous | 해석 → | |
| K383R | Uncertain significance | 0.089 | benign | 해석 → | |
| K448R | Uncertain significance | 0.113 | benign | 해석 → | |
| L129V | Uncertain significance | 0.695 | pathogenic | 해석 → | |
| L235M | Likely benign | 0.092 | benign | ✓ | 해석 → |
| L312Q | Uncertain significance | 0.052 | benign | 해석 → | |
| L455I | Uncertain significance | 0.387 | ambiguous | 해석 → | |
| M139K | Uncertain significance | 0.488 | ambiguous | 해석 → | |
| M139V | Uncertain significance | 0.162 | benign | 해석 → | |
| M142I | Uncertain significance | 0.365 | ambiguous | 해석 → | |
| M1K | Uncertain significance | 0.250 | benign | 해석 → | |
| M456I | Uncertain significance | 0.252 | benign | 해석 → | |
| M456L | Uncertain significance | 0.053 | benign | 해석 → | |
| N227S | Uncertain significance | 0.060 | benign | 해석 → | |
| N246K | Uncertain significance | 0.464 | ambiguous | 해석 → | |
| N258S | Benign/Likely benign | 0.058 | benign | ✓ | 해석 → |
| N306H | Uncertain significance | 0.073 | benign | 해석 → | |
| N341D | Uncertain significance | 0.081 | benign | 해석 → | |
| N353D | Uncertain significance | 0.104 | benign | 해석 → | |
| N3S | Uncertain significance | 0.063 | benign | 해석 → | |
| P224S | Uncertain significance | 0.100 | benign | 해석 → | |
| P230T | Uncertain significance | 0.068 | benign | 해석 → | |
| P243T | Uncertain significance | 0.131 | benign | 해석 → | |
| P249S | Uncertain significance | 0.082 | benign | 해석 → | |
| P372A | Likely benign | 0.127 | benign | ✓ | 해석 → |
| P378L | Uncertain significance | 0.099 | benign | 해석 → | |
| P379S | Uncertain significance | 0.148 | benign | 해석 → | |
| P402L | Uncertain significance | 0.988 | pathogenic | 해석 → | |
| P415A | Uncertain significance | 0.069 | benign | 해석 → | |
| P415S | Uncertain significance | 0.068 | benign | 해석 → | |
| Q237E | Uncertain significance | 0.085 | benign | 해석 → | |
| Q352K | Uncertain significance | 0.071 | benign | 해석 → | |
| Q358H | Uncertain significance | 0.299 | benign | 해석 → | |
| Q358H | Uncertain significance | 0.299 | benign | 해석 → | |
| Q371H | Uncertain significance | 0.290 | benign | 해석 → | |
| R135Q | Uncertain significance | 0.975 | pathogenic | 해석 → | |
| R135W | Uncertain significance | 0.995 | pathogenic | 해석 → | |
| R211Q | Uncertain significance | 0.096 | benign | 해석 → | |
| R239K | Uncertain significance | 0.065 | benign | 해석 → | |
| R363C | Uncertain significance | 0.377 | ambiguous | 해석 → | |
| R363H | Uncertain significance | 0.229 | benign | 해석 → | |
| R363S | Uncertain significance | 0.730 | pathogenic | 해석 → | |
| R381L | Uncertain significance | 0.978 | pathogenic | 해석 → | |
| R381Q | Uncertain significance | 0.893 | pathogenic | 해석 → | |
| R381W | Uncertain significance | 0.958 | pathogenic | 해석 → | |
| R52C | Uncertain significance | 0.846 | pathogenic | 해석 → | |
| S16N | Uncertain significance | 0.147 | benign | 해석 → | |
| S210F | Uncertain significance | 0.724 | pathogenic | 해석 → | |
| S213N | Uncertain significance | 0.972 | pathogenic | 해석 → | |
| S315P | Uncertain significance | 0.071 | benign | 해석 → | |
| S32F | Uncertain significance | 0.313 | benign | 해석 → | |
| S349T | Uncertain significance | 0.060 | benign | 해석 → | |
| S34I | Uncertain significance | 0.987 | pathogenic | 해석 → | |
| S76C | Uncertain significance | 0.932 | pathogenic | 해석 → | |
| T15K | Uncertain significance | 0.082 | benign | 해석 → | |
| T190M | Uncertain significance | 0.961 | pathogenic | 해석 → | |
| T203I | Uncertain significance | 0.174 | benign | 해석 → | |
| T287S | Conflicting classifications of pathogeni | 0.106 | benign | 해석 → | |
| T329I | Uncertain significance | 0.220 | benign | 해석 → | |
| T331P | Uncertain significance | 0.074 | benign | 해석 → | |
| T331S | Uncertain significance | 0.073 | benign | 해석 → | |
| T331S | Benign | 0.073 | benign | ✓ | 해석 → |
| T420S | Uncertain significance | 0.123 | benign | 해석 → | |
| T465I | Uncertain significance | 0.436 | ambiguous | 해석 → | |
| T5A | Uncertain significance | 0.062 | benign | 해석 → | |
| V133I | Uncertain significance | 0.108 | benign | 해석 → | |
| V166I | Uncertain significance | 0.185 | benign | 해석 → | |
| V168M | Uncertain significance | 0.118 | benign | 해석 → | |
| V171G | Uncertain significance | 0.947 | pathogenic | 해석 → | |
| V204M | Uncertain significance | 0.129 | benign | 해석 → | |
| V225D | Conflicting classifications of pathogeni | 0.167 | benign | 해석 → | |
| V225I | Uncertain significance | 0.074 | benign | 해석 → | |
| V231A | Uncertain significance | 0.106 | benign | 해석 → | |
| V231I | Benign/Likely benign | 0.073 | benign | ✓ | 해석 → |
| V23L | Uncertain significance | 0.329 | benign | 해석 → | |
| V23M | Uncertain significance | 0.179 | benign | 해석 → | |
| V241A | Uncertain significance | 0.165 | benign | 해석 → | |
| V292I | Uncertain significance | 0.077 | benign | 해석 → | |
| V344A | Uncertain significance | 0.134 | benign | 해석 → | |
| V344G | Uncertain significance | 0.184 | benign | 해석 → | |
| V344M | Uncertain significance | 0.117 | benign | 해석 → | |
| V346L | Uncertain significance | 0.102 | benign | 해석 → | |
| V36L | Uncertain significance | 0.333 | benign | 해석 → | |
| V57I | Uncertain significance | 0.134 | benign | 해석 → | |
| W162C | Uncertain significance | 0.999 | pathogenic | 해석 → | |
| Y83D | Uncertain significance | 0.944 | pathogenic | 해석 → | |
| M296I | - | 0.101 | benign | 해석 → |
AM 임계: 병원성 ≥ 0.564, 양성 < 0.34 (AlphaMissense 권장 컷오프, Cheng et al. Science 2023)
📚 데이터: NCBI ClinVar variant_summary (GRCh38, 최근 다운로드) + 우리 유전자 서브셋만 추출.